Skip to main content

From Natural Language to Autonomous Actions: A Progressive Promotion Model

· 16 min read
CLI version

CLI examples written for GitHub Copilot CLI v1.0.77. Flag names and behavior may change in later releases.

A pink-haired working with scientific equipment

You've built a workflow that works. But automating it requires engineering. Now you're stuck.

You know exactly how the process should run—you do it repeatedly, correctly, and it saves your team real time. But the moment you try to automate it, you hit a wall: write a script (and maintain it forever), hire engineers (and lose control to the project backlog), or give up and do it manually. None of these are wins.

There's a better way. What if you could capture your workflow in plain language, test it out, refine it, and gradually promote it to automation—keeping ownership the whole time? No developers required until you're absolutely sure the workflow is stable.

This is the progressive promotion model. Domain expertise starts as a natural language skill. You run it, refine it, test it. When repeated correct outcomes prove the flow is deterministic, the stable parts move behind MCP tools—reusable logic anyone can call. Then the skill can run autonomously. Ownership stays with the person who understands the process the whole time.


The automation tradeoff changed

The old tradeoff was simple: business value or engineering time. Only high-value workflows got built. Mid-tier work died in the backlog because no developer had bandwidth. The domain expert had to describe the process, hand it to a team, and wait months for the software to arrive.

This model shifts that cost to zero. The domain expert writes and runs the workflow in a skill right now, while they work. When the process proves reliable through repeated correct outcomes, the stable parts move behind MCP tools without a full rewrite. Cached tool definitions and typed contracts mean even small workflows can graduate.

The payoff is ownership. You hone your own process, keep control of your decisions, and run it yourself while it matures.


The four layers

Here is the path at a high level. The model puts each concern in its own layer. MCP stands for Model Context Protocol. In this post, an MCP tool is the typed interface that lets a skill, agent, or CI job call code in a predictable way:

LayerWhat it doesWho uses it
ScriptThe actual logic (API calls, file operations, data transforms)Everything below
MCP toolTyped interface around the script (JSON input → JSON output)Skills, agents, CI, other tools
SkillNatural language orchestration (when to call which MCP tool, in what order)Human-driven sessions
AgentAutonomous driver (same skill logic, but it decides when to run)Cron, webhooks, event triggers

The script is the logic. The MCP tool wraps it in a typed interface. The skill decides when to call which MCP tools. The agent runs the skill without you. Each layer has one job.

The key move: pull the script out of the skill and put it behind the MCP tool. Now any consumer can call it—another skill, an agent, a CI pipeline, an external system. The script is no longer locked inside one skill.

%%{init: { "theme": "base", "themeVariables": { "fontFamily": "Inter, ui-sans-serif", "primaryColor": "#f5e6d3", "primaryTextColor": "#3d2817", "primaryBorderColor": "#d4896b", "lineColor": "#c9956b", "secondaryColor": "#fdf4e8", "tertiaryColor": "#f9ead8", "background": "#fef9f5" } } }%%
graph LR
subgraph Before[" BEFORE: script-in-skill "]
direction TB
subgraph SkillBefore[" 💬 Skill "]
direction TB
InstrBefore[" Natural-language instructions "]
ScriptBefore[" 🔒 Script inside skill<br/><i>only this skill can use it</i> "]
InstrBefore --> ScriptBefore
end
end

ScriptBefore ==>|extract and relocate| ScriptAfter

subgraph After[" AFTER: script behind MCP "]
direction TB
subgraph SkillAfter[" 💬 Skill "]
direction TB
InstrAfter[" Natural-language instructions only "]
end
subgraph MCPAfter[" 🔧 MCP Tool "]
direction TB
ToolAfter[" Typed tool contract "]
ScriptAfter[" 📜 Script inside MCP tool<br/><i>reusable logic</i> "]
ToolAfter --> ScriptAfter
end
InstrAfter -->|"calls"| ToolAfter
AgentAfter[" 🤖 Agent "] -->|"calls"| ToolAfter
CIAfter[" ⚙️ CI "] -->|"calls"| ToolAfter
OtherAfter[" 💬 Other skills "] -->|"call"| ToolAfter
end

style Before fill:#fef9f5,stroke:#b8836f,stroke-width:2px,color:#3d2817
style After fill:#fef9f5,stroke:#d4896b,stroke-width:3px,color:#3d2817
style SkillBefore fill:#f9ead8,stroke:#d4896b,stroke-width:3px,color:#3d2817
style SkillAfter fill:#fdf4e8,stroke:#b8836f,stroke-width:3px,color:#3d2817
style MCPAfter fill:#f5e6d3,stroke:#d4896b,stroke-width:3px,color:#3d2817
style InstrBefore fill:#fdf4e8,stroke:#b8836f,stroke-width:2px,color:#3d2817
style ScriptBefore fill:#f9ead8,stroke:#d4896b,stroke-width:3px,color:#3d2817
style InstrAfter fill:#fdf4e8,stroke:#b8836f,stroke-width:2px,color:#3d2817
style ToolAfter fill:#f5e6d3,stroke:#d4896b,stroke-width:3px,color:#3d2817
style ScriptAfter fill:#f9ead8,stroke:#d4896b,stroke-width:3px,color:#3d2817
style AgentAfter fill:#fdf4e8,stroke:#b8836f,stroke-width:2px,color:#3d2817
style CIAfter fill:#fdf4e8,stroke:#b8836f,stroke-width:2px,color:#3d2817
style OtherAfter fill:#fdf4e8,stroke:#b8836f,stroke-width:2px,color:#3d2817

The resulting stack looks like this:

%%{init: { "theme": "base", "themeVariables": { "fontFamily": "Inter, ui-sans-serif", "primaryColor": "#f5e6d3", "primaryTextColor": "#3d2817", "primaryBorderColor": "#d4896b", "lineColor": "#c9956b", "secondaryColor": "#fdf4e8", "tertiaryColor": "#f9ead8", "background": "#fef9f5" } } }%%
graph TD
A[" 📜 Script<br/><i>The logic</i> "] --> B[" 🔧 MCP Tool<br/><i>Typed interface</i> "]
B --> C[" 💬 Skill<br/><i>Orchestration</i> "]
B --> D[" 🤖 Agent<br/><i>Autonomous driver</i> "]
B --> E[" ⚙️ CI/CD<br/><i>No LLM needed</i> "]

style A fill:#f9ead8,stroke:#d4896b,stroke-width:3px,color:#3d2817
style B fill:#f5e6d3,stroke:#d4896b,stroke-width:3px,color:#3d2817
style C fill:#fdf4e8,stroke:#b8836f,stroke-width:3px,color:#3d2817
style D fill:#fdf4e8,stroke:#b8836f,stroke-width:3px,color:#3d2817
style E fill:#fdf4e8,stroke:#b8836f,stroke-width:3px,color:#3d2817

The script gets written once, wrapped in a typed tool once, and then only the driver changes during promotion from interactive to autonomous.


How work naturally evolves

Start in natural language. Let the domain expert hone the process. Promote only after repeated correct outcomes prove the flow.

Here's how that progression works in practice:

A new skill starts with the LLM doing everything inline. Your instructions might say "query the GitHub API for recent releases, then compare against our changelog." The first version is written in plain language, not code. You stay in control.

Correctness matters more than speed here. You run the skill, adjust the instructions, and decide if the outcome matches your judgment. Repeat it several times until it consistently produces the right result.

Phase B: Determinism emerges

After a few runs, you spot a pattern. Step 2 is always the same. Same API call, same parsing, same output format. The LLM isn't adding judgment here—it's just following a mechanical procedure that you've already validated.

This is your signal to move. When the same API calls and parsing steps keep showing up, and the outcomes have been consistently correct, that part is ready to extract.

Phase C: Extract to MCP (not script-in-skill)

Now make the move. Extract the deterministic logic into a typed MCP tool instead of keeping it inside the skill. You still control the workflow through the skill. The stable, reusable part moves behind a typed interface.

%%{init: { "theme": "base", "themeVariables": { "fontFamily": "Inter, ui-sans-serif", "primaryColor": "#f5e6d3", "primaryTextColor": "#3d2817", "primaryBorderColor": "#d4896b", "lineColor": "#c9956b", "secondaryColor": "#fdf4e8", "tertiaryColor": "#f9ead8", "background": "#fef9f5" } } }%%
graph LR
subgraph "❌ Wrong path"
W1[" Skill owns the script "] --> W2[" 🔒 Script stays inside skill "] --> W3[" Only this skill can use it "]
end
subgraph "✅ Right path"
R1[" Extract script "] --> R2[" 🔧 MCP tool owns the script "] --> R3[" Skill calls tool "] --> R4[" Agents, CI, other skills can call it too "]
end

style W1 fill:#f9ead8,stroke:#d4896b,stroke-width:2px,color:#3d2817
style W2 fill:#f9ead8,stroke:#d4896b,stroke-width:2px,color:#3d2817
style W3 fill:#fef9f5,stroke:#b8836f,stroke-width:2px,color:#4a3428
style R1 fill:#f5e6d3,stroke:#d4896b,stroke-width:3px,color:#3d2817
style R2 fill:#f5e6d3,stroke:#d4896b,stroke-width:3px,color:#3d2817
style R3 fill:#f5e6d3,stroke:#d4896b,stroke-width:3px,color:#3d2817
style R4 fill:#f5e6d3,stroke:#d4896b,stroke-width:3px,color:#3d2817

The skill now calls detect_releases instead of embedding the logic. The MCP tool has a JSON input schema, a JSON output schema, and error handling. It's independently testable. Any consumer—another skill, an agent, a CI pipeline, or an external system—can call it.

Phase D: Promote to agent

When the process is reliable and you want it to run without you, promote to autonomous execution. The agent uses the same MCP tools. The only difference is who drives: you (interactive) or the agent (autonomous).

%%{init: { "theme": "base", "themeVariables": { "fontFamily": "Inter, ui-sans-serif", "primaryColor": "#f5e6d3", "primaryTextColor": "#3d2817", "primaryBorderColor": "#d4896b", "lineColor": "#c9956b", "secondaryColor": "#fdf4e8", "tertiaryColor": "#f9ead8", "background": "#fef9f5" } } }%%
graph TB
subgraph MCP[" 🔧 MCP Server (built once) "]
T1[" detect_releases "]
T2[" generate_metadata "]
T3[" analyze_impact "]
end

subgraph Interactive[" 💬 Phase C: Skill drives "]
S[" You say: 'sync releases' "]
S --> T1
T1 --> T2
T2 -->|"⏸ You approve PRs"| T3
end

subgraph Autonomous[" 🤖 Phase D: Agent drives "]
AG[" Cron: daily 8am "]
AG --> T1
T1 --> T2
T2 -->|"📱 Teams notification"| T3
end

style MCP fill:#fef9f5,stroke:#d4896b,stroke-width:3px,color:#3d2817
style Interactive fill:#fef9f5,stroke:#b8836f,stroke-width:2px,color:#3d2817
style Autonomous fill:#fef9f5,stroke:#b8836f,stroke-width:2px,color:#3d2817
style T1 fill:#f5e6d3,stroke:#d4896b,stroke-width:2px,color:#3d2817
style T2 fill:#f5e6d3,stroke:#d4896b,stroke-width:2px,color:#3d2817
style T3 fill:#f5e6d3,stroke:#d4896b,stroke-width:2px,color:#3d2817
style S fill:#fdf4e8,stroke:#b8836f,stroke-width:2px,color:#3d2817
style AG fill:#fdf4e8,stroke:#b8836f,stroke-width:2px,color:#3d2817

The MCP server does not change. The tools do not change. The scripts do not change. Only the driver changes.


Where my first design stopped

My forty-skill portfolio showed me where this breaks if you stop too early. My original approach was:

  1. Write a skill (natural language instructions)
  2. Notice a pattern is deterministic (same inputs → same outputs)
  3. Extract that logic into a script inside the skill
  4. Done

The problem is step 4. The skill works. The script works. But only that skill can use it. No other skill can call it. No agent can use it. No CI pipeline can run it. When you need that logic elsewhere, you copy-paste the whole thing.

After forty skills, I had forty pieces of scattered process knowledge with scripts locked inside individual skills, no typed contracts, no reusability, and no clear path to autonomous execution. The scripts weren't going anywhere.

A pink-haired girl at a garden crossroads, with boxes stacked against a dead-end wall, watercolor illustration

Why MCP tools instead of scripts-in-skills

The decision to extract into MCP rather than keep scripts inside skills comes down to three things:

Reusability

A script locked inside one skill is only callable by that skill. An MCP tool is callable by any skill, any agent, any CI pipeline, and any external system. Reuse changes everything.

Typed contracts

A script takes string arguments. An MCP tool has a JSON input schema and JSON output schema. The LLM knows exactly what to send and what to expect back. No parsing surprises.

Prompt caching

The cost reason is direct: MCP tool definitions live in the system prompt and get cached at a 50-90% discount. Every time you spawn an agent fresh, you lose that cache.

WhatCostCache
Skill instructions~0Part of system prompt (cached)
MCP tool definitions~400-1600Part of system prompt (cached)
Agent spawn~10-25K per runFresh context (uncached)

Using MCP tools instead of spawning fresh agents cut uncached tokens by roughly 90%.


The decision point

When you find yourself writing a script inside a skill, ask one question:

Will anything other than this skill ever need to call this logic?

  • If yes → extract to MCP immediately
  • If maybe someday → extract to MCP (future reuse is cheaper than a later move)
  • If truly never (one-off, will be deleted soon) → script-in-skill is fine

In my forty-skill portfolio, the answer was almost always yes.


What promotion looks like in practice

I have a content pipeline called Echo that detects new SDK releases, generates documentation metadata, and produces content reports. It started as a Squad agent spawning fresh context every time.

After extracting to MCP + skill:

BeforeAfter
~25K uncached tokens per run~1-2K uncached tokens per run
Squad agent spawned freshSkill in cached system prompt
Two separate context windowsOne cached context window
Scripts locked inside agentTools callable by anything

The scripts themselves didn't change. The structured JSON output envelopes they produced already matched MCP tool responses—same schema, different transport.

Before: Script → JSON file → next skill reads file from disk
After: Script → JSON → MCP protocol → any consumer gets it directly


The cost model across stages

Each stage changes the driver but reuses the same tools. Costs drop because the driver changes:

StagePer-run costDriverWhat saves
Skill + MCP~1-2K uncachedYou, interactivelyLowest token use. Tools cached. Only I/O is new.
Agent + MCP~5-10K uncachedAgent, autonomouslyAgent charter is fresh, but tools stay cached.
CI/CD0 tokensGitHub ActionNo LLM at all for deterministic steps.
Agent spawn (old way)~25K uncachedSquad coordinatorTwo fresh windows every time. Highest token use.

As work matures, it needs less LLM reasoning per run, until CI/CD needs none at all.


Context occupation cost of MCP

MCP tools have lower per-token cost when cached, but they occupy context window space every turn, even when unused. A 4-tool server adds ~600-1600 tokens to every conversation.

Control this with grouping and toggling:

StrategyHow it works
Group by workflowCombine related tools into one server (content-pipeline-mcp for all content work)
Toggle per taskEnable the server when doing that work, disable when doing something else
Skill as gatekeeperThe skill reminds you to enable MCP if it's off

The pattern: skill triggers workflow (zero idle cost) → skill activates MCP (cost only when needed) → tools do work (cached calls). The MCP stays enabled only when you're using it.


Running autonomously with Copilot CLI

Once a skill is promoted to an agent, the next need is running it without a human session. Copilot CLI supports this today:

# Simplest autonomous run
copilot -p "Run the echo pipeline" --yolo --silent

# With specific agent and model
copilot -p "Execute" \
--agent echo-pipeline \
--autopilot --no-ask-user \
--yolo --silent \
--model gpt-5.4

# Sealed sandbox: only specific tools available
copilot -p "Sync releases" \
--additional-mcp-config @workflows/echo-sync/mcp-config.json \
--available-tools='content-pipeline-mcp/*' \
--no-ask-user --autopilot --silent

The key flags:

FlagWhat it does
-p "prompt"Non-interactive mode (exits after completion)
--agent nameUse a specific .agent.md file
--autopilotAgent continues without asking permission
--no-ask-userDisable all user questions
--yoloApprove all tools, paths, and URLs
--available-tools='...'Only these tools exist (sealed sandbox)
--silentOutput only the agent's response

For CI/CD, authenticate with a fine-grained PAT:

COPILOT_GITHUB_TOKEN=github_pat_xxx copilot -p "Run pipeline" \
--agent echo-pipeline --yolo --silent --no-auto-update

The sealed sandbox

When something runs autonomously, the context must be fully specified at launch and locked in place. The agent gets exactly the tools it needs and nothing extra. The glass bell jar is boring on purpose.

A sealed sandbox manifest specifies:

  1. Identity: who the agent is
  2. Available tools: exhaustive list—nothing else exists
  3. Execution plan: exact steps, no deviation
  4. Error handling: complete rules, no improvisation
  5. Output routing: where results go
  6. Boundaries: hard constraints (violation = immediate exit)

Copilot CLI does this through --available-tools and the "tools" allowlist in MCP config. The MCP server might have twenty tools. The agent only sees three.

{
"mcpServers": {
"content-pipeline": {
"command": "node",
"args": ["./mcp-servers/content-pipeline/index.js"],
"tools": ["detect_releases", "generate_metadata", "analyze_impact"]
}
}
}

Similar progressions appear in other domains under different names:

SourceTheir patternMaps to this model
Anthropic, "Building Effective Agents"Start simple, increase complexityAugmented LLM → Workflows → Agents
Claude Agent SDKPermission modes as autonomy dialplanacceptEditsdontAsk
MCP Skills Working GroupProgressive disclosureTools → Skills → Agents
SAE J3016 (autonomous vehicles)L0–L5 autonomy levelsHuman-in-loop → human-on-loop → human-out-of-loop
SRERunbook → Automation → Self-HealingManual → scripted → autonomous
LangGraphinterrupt() architectureRemove interrupts = autonomous

The pattern exists in pieces across many domains. What was missing: a practical "Skill → MCP → Agent → CI" progression with extraction checklists and validation gates, tailored specifically for domain experts who want to keep ownership.


The rule I use now

When a process proves repeatable, reusable logic moves to an MCP tool. Scripts-in-skills are prototype code.

Ask three questions: Who owns this? How stable is it? What driver does it need now?

If the work is...Use...
Still being figured outSkill (cheap exploration)
Repeatable and deterministicMCP tool (reusable, typed)
Needs to run without youAgent (autonomous driver)
Fully deterministic, no judgmentCI/CD (no LLM at all)

What's next

Echo is the pilot. Once the content-pipeline MCP server wraps Echo's three scripts and the /echo-sync skill drives them interactively, validation has two parts: the process still produces the right output, and the token savings are real.

Then come Finn, the reporting tools, and the rest one by one.

The pattern is straightforward: Start with the person who owns the domain knowledge. Capture the workflow in a skill. Run it until the outcomes are consistently correct. Move the repeatable parts behind MCP tools. Change the driver only when autonomy helps.

Ownership stays with the person who understands the process. The system matures around that expertise.